Search for sequences based on environmental metadata

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Summary of search results

Target gene
Target gene Count
16S ssu rRNA 10178
16s ssu rRNA 89
18S ssu rRNA 3840
COI 362
ITS 814
metagenome 453
particulate methane monooxygenase 1
ureC 38
Target subfragment
Target subfragment Count
COI1-COI2 362
ITS 405
ITS1 270
ITS1-4 39
ITS1-5.8S-ITS2 36
ITS2 64
V2-V3 32
V3-V4 1071
V4 737
V5-V6 36
V6 20
na 12
subunit A (pmoA) 1
v1-v3 826
v3 32
v3-v4 1475
v3-v5 46
v4 3281
v4-v5(Bacteria-Archaea);v9(Eukaryota) 9
v5-v6 30
v5-v7 28
v6 2034
v7-v8 192
v9 1245
Run type
Run type Count
250bp paired end 31
250bp-PE 618
300 bp paired end 1270
300bp 305
300bp-PE 973
Paired end sequencing with plasmid primers 55
Sanger 176
na 12
no 15
paired-end 1166
single 328
yes 20
Sampling Protocol
Sampling protocol Count
Uwitec multicorer 300
Niskin 1088
pump sample 14
tissue biopsy 525
SCUBA 1247
CTD Rosette/Niskin bottle 254
Event year
Year Count
1913 30
1937 12
1988 6
1997 658
2000 1
2002 29
2003 46
2004 59
2005 90
2006 48
2007 2780
2008 3054
2009 671
2010 1569
2011 2026
2012 748
2013 825
2014 1758
2015 1419
2016 30
2017 108
42258 3
42267 3
Event month
Month Count
1 2849
2 884
3 1623
4 338
5 337
6 415
7 304
8 558
9 547
10 346
11 1145
12 2658
2009 108

1 - 20 of 17,326 results

Variable Text value Numeric value Unit Sequences accession number Bioproject Project
NO3_NO2 0.50000 micro Mol AY493572.1|JF269173 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493612.1|AY4933650.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.20000 micro Mol BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.50000 micro Mol AY493582.1|AY493639.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.20000 micro Mol AY493620.1|AY493634.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493625 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493578.1|AY493640.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.20000 micro Mol AY493617.1|AY493647.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.60000 micro Mol AY493616|AY493645 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.30000 micro Mol AY493576.1|AY493654.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.60000 micro Mol AY493580.1|AY493641.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.70000 micro Mol AY493574.1|AY493643.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493579.1|JF269171 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.30000 micro Mol AY493608.1|AY493652.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493594 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493584.1|AY493637.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493609.1|AY493653.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.20000 micro Mol AY493583|AY493644 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493616.1|AY493645.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
Definition of fields in download file is available here

Map attribution: Tiles © Esri — Source: Esri, DeLorme, NAVTEQ, USGS, Intermap, iPC, NRCAN, Esri Japan, METI, Esri China (Hong Kong), Esri (Thailand), TomTom, 2012