Search for sequences based on environmental metadata

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Summary of search results

Target gene
Target gene Count
16S ssu rRNA 13744
16s ssu rRNA 89
18S ssu rRNA 3904
COI 362
ITS 814
mRNA 33
metagenome 463
particulate methane monooxygenase 1
ureC 38
Target subfragment
Target subfragment Count
COI1-COI2 362
ITS 405
ITS1 270
ITS1-4 39
ITS1-5.8S-ITS2 36
ITS2 64
V2-V3 32
V3-V4 1071
V4 794
V5-V6 36
V6 20
V9 42
na 12
subunit A (pmoA) 1
v1-v3 826
v3 32
v3-v4 1475
v3-v5 46
v4 3303
v4-v5(Bacteria-Archaea);v9(Eukaryota) 9
v5-v6 30
v5-v7 28
v6 4971
v7-v8 192
v9 1245
Run type
Run type Count
250bp paired end 31
250bp-PE 618
300 bp paired end 1270
300bp 305
300bp-PE 973
Paired end sequencing with plasmid primers 55
Sanger 176
na 12
no 15
paired 6
paired-end 1166
single 334
yes 20
Sampling Protocol
Sampling protocol Count
Rete 2
diving 16
dredge 331
pump sample 14
tissue biopsy 525
manual 142
Uwitec multicorer 300
seawater intake 2937
SCUBA 1247
dredge 7
rosette sampler 221
Niskin 1088
Carotatore 48
CTD Rosette/Niskin bottle 254
Event year
Year Count
1913 30
1937 12
1988 6
1990 77
1995 94
1997 658
1998 6
2000 1
2002 29
2003 130
2004 59
2005 556
2006 48
2007 2780
2008 3054
2009 793
2010 1595
2011 2219
2012 1086
2013 2677
2014 2326
2015 1425
2016 23685
2017 108
42258 3
42267 3
Event month
Month Count
1 9852
2 3297
3 1961
4 344
5 337
6 8408
7 3137
8 5560
9 817
10 607
11 1766
12 3173
2009 108

1 - 20 of 44,826 results

Variable Text value Numeric value Unit Sequences accession number Bioproject Project
NO3_NO2 0.50000 micro Mol AY493572.1|JF269173 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493612.1|AY4933650.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.20000 micro Mol BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.50000 micro Mol AY493582.1|AY493639.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.20000 micro Mol AY493620.1|AY493634.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493625 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493578.1|AY493640.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.20000 micro Mol AY493617.1|AY493647.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.60000 micro Mol AY493616|AY493645 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.30000 micro Mol AY493576.1|AY493654.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.60000 micro Mol AY493580.1|AY493641.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.70000 micro Mol AY493574.1|AY493643.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493579.1|JF269171 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.30000 micro Mol AY493608.1|AY493652.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493594 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493584.1|AY493637.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493609.1|AY493653.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 0.20000 micro Mol AY493583|AY493644 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
NO3_NO2 1.20000 micro Mol AY493616.1|AY493645.1 BCCM/ULC Cyanobacteria culture collection at the University of Liège (ISO9001 certified)
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Map attribution: Tiles © Esri — Source: Esri, DeLorme, NAVTEQ, USGS, Intermap, iPC, NRCAN, Esri Japan, METI, Esri China (Hong Kong), Esri (Thailand), TomTom, 2012