Antarctic Surface Snow Bacterial Communities

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Resource URL https://ipt.biodiversity.aq/resource?r=antarctic_surface_snow_bacterial_communities
Last updated Dec. 15, 2020
Project contact Malard Lucie
Abstract Amplicon sequencing dataset (Illumina MiSeq) of Bacteria (16S ssu rRNA) in surface snow collected between the South Orkney Islands and the Ellsworth Mountains between December 2012 and January 2014.
Rights http://creativecommons.org/licenses/by/4.0/legalcode
Sequence data PRJEB29215
Citation Malard L, Sabacka M, Magiopoulos I, Mowlem M, Hodson A, Tranter M, Siegert M, Pearce D (2019): Antarctic Surface Snow Bacterial Communities. v1.0. SCAR - Microbial Antarctic Resource System. Dataset/Metadata. https://ipt.biodiversity.aq/resource?r=antarctic_surface_snow_bacterial_communities&v=1.0 (Available: Polar 'Omics Links to Antarctic, Arctic and Alpine Research. Antarctic Biodiversity Portal. Scientific Committee for Antarctic Research. www.biodiversity.aq/pola3r. Accessed: 2021-08-04)

Map attribution: Tiles © Esri — Source: Esri, DeLorme, NAVTEQ, USGS, Intermap, iPC, NRCAN, Esri Japan, METI, Esri China (Hong Kong), Esri (Thailand), TomTom, 2012

Summary statistics
Sampling event records 37
Sample records 37
Sequence metadata records 37
Environmental metadata records 74
Sampling events
Year Records
2012 25
2013 12
Month Records
1 6
2 3
3 3
12 25
Sample metadata
Sample Metadata Records
Location Amundsen Sea 13
Location Antarctica:Bratina Island 7
Location Antarctica:Miers Valley 3
Location Beaufort Sea 6
Location South Shetland Islands:Deception Island 7
Environmental biome ocean biome [ENVO:01000048] 20
Environmental biome polar desert biome [ENVO:01000186] 17
Sequence metadata
Sequence metadata Records
Target gene 16S ssu rRNA 37
Target subfragment v3-v4 37
Additional metadata
Variable Records
elev 37
snow_cover 37