| Resource URL | https://ipt.biodiversity.aq/resource?r=synoicum_adareanum_microbiome |
|---|---|
| Source file(s) | polaaar/project_files/Murray_Synoicum_PRJNA597083_PRJNA602715.csv |
| Last updated | Dec. 17, 2020 |
| Project contact | Murray Alison |
| Abstract | None |
| Rights | http://creativecommons.org/publicdomain/zero/1.0/legalcode |
| Sequence data |
PRJNA597083
PRJNA602715 |
| Citation | Baker BJ. 2020. Synoicum adareanum sampling u/w video Mar 2011 Palmer Station Antarctica doi:10.5061/dryad.gxd2547gw, Dryad Data. (Available: Polar 'Omics Links to Antarctic, Arctic and Alpine Research. Antarctic Biodiversity Portal. Scientific Committee for Antarctic Research. www.biodiversity.aq/pola3r. Accessed: 2023-03-30) |
Map attribution: Tiles © Esri — Source: Esri, DeLorme, NAVTEQ, USGS, Intermap, iPC, NRCAN, Esri Japan, METI, Esri China (Hong Kong), Esri (Thailand), TomTom, 2012
| Sampling event records | 93 |
|---|---|
| Sample records | 93 |
| Sequence metadata records | 93 |
| Environmental metadata records | 1446 |
| Year | Records |
|---|---|
| 2004 | 1 |
| 2007 | 15 |
| 2008 | 14 |
| 2011 | 63 |
| Month | Records |
|---|---|
| 2 | 3 |
| 3 | 47 |
| 4 | 18 |
| 5 | 15 |
| 7 | 2 |
| 8 | 3 |
| 9 | 4 |
| Sample Metadata | Records | |
|---|---|---|
| Location | Amundsen Sea | 13 |
| Location | Antarctica | 55 |
| Location | Antarctica:Bratina Island | 7 |
| Location | Antarctica:Miers Valley | 3 |
| Location | Beaufort Sea | 6 |
| Location | South Shetland Islands:Deception Island | 8 |
| Environmental biome | ocean biome [ENVO:01000048] | 20 |
| Environmental biome | polar desert biome [ENVO:01000186] | 73 |
| Sequence metadata | Records | |
|---|---|---|
| Target gene | 16S ssu rRNA | 93 |
| Target subfragment | V3-V4 | 63 |
| Target subfragment | V4 | 14 |
| Run type | 300 bp paired end | 77 |
| Run type | Sanger | 16 |
| Variable | Records |
|---|---|
| barcode_3 | 77 |
| barcode_5 | 77 |
| biotic_relationship | 79 |
| chlorophyll | 5 |
| decimallatitude | 93 |
| decimallongitude | 93 |
| depth | 77 |
| diss_org_carb | 8 |
| host_life_stage | 79 |
| host_taxid | 79 |
| isol_growth_condt | 16 |
| no2_plus_no3 | 11 |
| oxy_stat_samp | 16 |
| pala_avg_peak_area_per_g_host_tissue | 63 |
| pala_avg_percentage_peak_area | 63 |
| pala_std_deviation_avg_peak_area_per_g_host_tissue | 63 |
| pala_std_deviation_of_avg_percentage_peak_area | 63 |
| part_org_carb | 4 |
| part_org_carb_part_org_nitro_ratio | 4 |
| part_org_nitro | 4 |
| phosphate | 11 |
| rel_to_oxygen | 93 |
| salinity | 2 |
| samp_size | 77 |
| samp_store_temp | 79 |
| samp_vol_we_dna_ext | 77 |
| samplingProtocol | 93 |
| silicate | 11 |
| specific_host | 16 |
| temp | 13 |