Antarctic cryptoendolithic fungal communities ITS amplicon sequencing

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Resource URL https://ipt.biodiversity.aq/resource?r=antarctic_cryptoendolithic_microbial_fungi_its
Source file(s) polaaar/project_files/Coleine_PRJNA453198.csv
Last updated Dec. 10, 2020
Project contact Coleine Claudia
Abstract Amplicon sequencing dataset of cryptoendolithic (sandstone) fungal communities (ITS1 marker gene) in Victoria Land (continental Antarctica).
Rights http://creativecommons.org/licenses/by/4.0/legalcode
Sequence data PRJNA453198
Citation Coleine C, Zucconi L, Onofri S, Pombubpa N, Stajich J, Selbman L (2018): Antarctic cryptoendolithic fungal communities ITS amplicon sequencing. v1.2. SCAR - Microbial Antarctic Resource System. Dataset/Metadata. https://ipt.biodiversity.aq/resource?r=antarctic_cryptoendolithic_microbial_fungi_its&v=1.2 (Available: Polar 'Omics Links to Antarctic, Arctic and Alpine Research. Antarctic Biodiversity Portal. Scientific Committee for Antarctic Research. www.biodiversity.aq/pola3r. Accessed: 2021-10-20)

Map attribution: Tiles © Esri — Source: Esri, DeLorme, NAVTEQ, USGS, Intermap, iPC, NRCAN, Esri Japan, METI, Esri China (Hong Kong), Esri (Thailand), TomTom, 2012

Summary statistics
Sampling event records 99
Sample records 99
Sequence metadata records 97
Environmental metadata records 16
Sampling events
Year Records
2001 40
2013 2
2015 28
2016 29
Month Records
1 2
3 13
4 12
7 14
8 1
12 57
Sample metadata
Sample Metadata Records
Location Amundsen Sea 15
Location Antarctica 59
Location Antarctica:Bratina Island 7
Location Antarctica:Miers Valley 3
Location Beaufort Sea 6
Location South Shetland Islands:Deception Island 8
Environmental biome ocean biome [ENVO:01000048] 22
Environmental biome polar desert biome [ENVO:01000186] 77
Sequence metadata
Sequence metadata Records
Target gene ITS 97
Target subfragment ITS1 97
Additional metadata
Variable Records
ammonium 2
chlorophyll 2
depth 2
nitrite 2
phosphate 2
salinity 2
silicate 2
temp 2